sahuno/claude_gemini_container
sahuno
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Claude & Gemini Container
Containerized AI coding assistants (Claude Code, Gemini CLI, OpenAI Codex) with bioinformatics workflow tools (Snakemake, Nextflow, nf-core). Multi-arch: amd64 + arm64.
Current Versions (Updated: June 2026)
| Tool | Version | Description |
|---|---|---|
| Claude Code | 2.1.175 | Anthropic's AI coding CLI |
| Gemini CLI | 0.46.0 | Google's Gemini AI CLI |
| OpenAI Codex | 0.139.0 | OpenAI's Codex CLI |
| Snakemake | 9.23.0 | Workflow management system |
| nf-core | 4.0.2 | Community curated Nextflow pipelines |
Versions are auto-updated daily by CI — see CI / Automation.
Quick Start
bash# Pull docker pull sahuno/claude_gemini_container:latest # Run interactive with API keys and a workspace mount docker run -it --rm \ -e ANTHROPIC_API_KEY=your_key \ -e GEMINI_API_KEY=your_key \ -e OPENAI_API_KEY=your_key \ -v $(pwd):/workspace \ sahuno/claude_gemini_container:latest # Show installed tool versions docker run --rm sahuno/claude_gemini_container:latest container-info
What's Included
- AI CLI tools — Claude Code, Gemini CLI, OpenAI Codex
- Workflow management — Snakemake (with SLURM executor plugin), Nextflow, nf-core
- Python 3 scientific stack — numpy, pandas, matplotlib, seaborn, plotly, scipy, scikit-learn, jupyter
- Container runtime — Apptainer 1.4.0 (amd64 only, for HPC compatibility)
- Java — OpenJDK 17 (required by Nextflow)
- Dev tools — GitHub CLI (
gh), git, git-lfs, vim, nano, curl, wget, rsync, jq, tree
Singularity / Apptainer (HPC)
bash# Pull from Docker Hub (simplest method) singularity pull docker://sahuno/claude_gemini_container:latest # Run with bind mounts export ANTHROPIC_API_KEY=your_key singularity exec --bind /data:/data claude_gemini_container_latest.sif claude singularity exec --bind /data:/data claude_gemini_container_latest.sif snakemake --version
CI / Automation
Two GitHub Actions workflows maintain this image:
| Workflow | Trigger | What it does |
|---|---|---|
check-versions.yml | Daily at 17:00 UTC + manual | Checks npm/PyPI for new versions of all 5 tools; opens a PR if any changed |
docker-build.yml | Push to main + PR (validate only) | Runs smoke tests and Trivy security scan, then builds multi-arch and pushes to Docker Hub |
Image tags pushed on each deploy:
:latest— always the newest build:claude-X.Y.Z— pinned to the Claude Code version:YYYYMMDD— date-pinned for reproducible pulls
A GitHub Release is created for every deploy with pinned pull commands.
Environment Variables
bashexport ANTHROPIC_API_KEY=your_key # Claude Code export GEMINI_API_KEY=your_key # Gemini CLI export OPENAI_API_KEY=your_key # OpenAI Codex
Required Secrets (GitHub Actions)
| Secret | Used by |
|---|---|
DOCKER_USERNAME | Docker Hub login |
DOCKERHUB_TOKEN | Docker Hub push + description sync |
镜像拉取方式
您可以使用以下命令拉取该镜像。请将 <标签> 替换为具体的标签版本。如需查看所有可用标签版本，请访问 标签列表页面。
轩辕镜像加速拉取命令点我查看更多 claude_gemini_container 镜像标签
docker pull docker.xuanyuan.run/sahuno/claude_gemini_container:<标签>
DockerHub 原生拉取命令
docker pull sahuno/claude_gemini_container:<标签>
镜像拉取常见问题
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oldzhang
运维工程师
Linux服务器
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"Docker访问体验非常流畅，大镜像也能快速完成下载。"